Tag Archives: megablast

BLAST from terminal against NCBI database using Perl

Using a Perl script you can BLAST your FASTA sequence file against the NCBI database directly from your terminal. The script is provided by the NCBI and you can download it here: ftp://ftp.ncbi.nlm.nih.gov/blast/documents/web_blast.pl The simple usage is: $ perl web_blast.pl … Continue reading

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